Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952264.1_cds_XP_016492008.1_82264
CDS Infomation

[gene=LOC107811564] [db_xref=GeneID:107811564] [protein=U-box domain-containing protein 40-like] [protein_id=XP_016492008.1] [location=complement(26668..28119)] [gbkey=CDS]
Sequence

ATGGGAAGTGGAAAGCAAAGATGGAGAATCTCCTTCCACAAATCTCCAATAAAAGTAAAA
CACCCTCCAATGGAATTCATCTGTCCAATTTCTGGTTCTCTTATGGCTGATCCTATAATT
GTCTCTTCAGGCCATACCTTCGAACGTCACTGTGTTCTTGCCTGTAAATCCCTCTCTTTC
ACCCCCATTTTACCTGATAATTCTATTCCCAATTTCTCCACTATCATCCCTAATCGCGCC
CTCAAATCCACCATTCTCAACTGGTGCTCTTCTTCCCATATCGATCCTCCTATACCCCTC
GATTTCCTCTCTGCTGAAAATCTCGTCCGTACGTTAATGGCTACCCAAAACACCAATAAT
ACCAAGAATTGTGATGTTATGAACCGGTTCATTGAGTCTGTAACACTGTTGAATCGTCAA
ATTTCTACTACTTCTGAGGAGTCTGTGACTCCTACGAGTGGACCCACAACTGCTCTAACT
CGACCCTGCTGTTACTCTTCAGCATCGTCCTCAGAAATGGACCCCACAAACCCCAAGTCG
TGTGAAGAAGATGAACTCATCGTCAAACTGAAGAGCTCCCACGTGTTTGAACAAGAAGAA
GCTGTGATCTCACTTAGAAAGCTGACCCGGACCCGGGAAGAAACCCGTTTTCAGCTCTGC
ACTCCTCGTTTGCTCTCAGCTCTCCGTTCTGTCATCTCCTCGAGATATGCTTCAGTACAG
GTGAATTCCATAGCAGCGCTAGTGAACCTTTCCTTAGAAAATGGAAACAAGGTGAAGATT
GTTCGTTCTGGAATTGTTCCGCCGTTAATTGACGTGTTAAAAGGAGGATTCCCTGAATCG
CAAGAACATGCTGCAGGTGCACTTTTCAGTTTAGCTTTAGATGATCAGAACAAAACTGCA
ATTGGGGTTTTGGGGGCACTGCCTCCTCTGCTTCACTCTCTCCGTTCTGAGTCAGAACGG
ATGCGGCATGATTCGGCTTTGGCACTGTATCATCTTTCTTTGGTTCAGAGTAACAGGGCT
AAGTTGGTGAAACTCGGGGCGGTTCAGTCGCTATTAGGCATGGTGAGAACAGGTCATATG
ACGGGACGAATTCTGTCAATATTGTGTAACATGGCAGCGAGTTTAGAGGGGAGAGGATCT
ATGCTTGATGGGGGTGCTGTGGAGTGTTTTGTGGGTATGTTGAGACAGGGAGAGTTTGAT
GCAGAATCTATTCGTGAGAGTTGTGTTACTGCATTATATGGACTAAGTCATGGTGGACTT
AGGTTTAAAGGATTGGCAAAAGAGGCTGCTGCAGAAGACTTGTTGATAACACTTGAGGAA
ATTTTGGAAGGTGAGAAAGCCAAGGATAAAGTTAGGAAGATATTGCAGGTGTTGAGGGAG
AAAGACGAAGAGGAGGAAGAAATTGACTGGGAGGAGTTGCTTAATTCTGATGGTGATACA
AATTCTGCATAG

Peptide Sequence

PEP ID

XP_016492008.1
PEP Infomation

PREDICTED: U-box domain-containing protein 40-like [Nicotiana tabacum]
Sequence

MGSGKQRWRISFHKSPIKVKHPPMEFICPISGSLMADPIIVSSGHTFERHCVLACKSLSF
TPILPDNSIPNFSTIIPNRALKSTILNWCSSSHIDPPIPLDFLSAENLVRTLMATQNTNN
TKNCDVMNRFIESVTLLNRQISTTSEESVTPTSGPTTALTRPCCYSSASSSEMDPTNPKS
CEEDELIVKLKSSHVFEQEEAVISLRKLTRTREETRFQLCTPRLLSALRSVISSRYASVQ
VNSIAALVNLSLENGNKVKIVRSGIVPPLIDVLKGGFPESQEHAAGALFSLALDDQNKTA
IGVLGALPPLLHSLRSESERMRHDSALALYHLSLVQSNRAKLVKLGAVQSLLGMVRTGHM
TGRILSILCNMAASLEGRGSMLDGGAVECFVGMLRQGEFDAESIRESCVTALYGLSHGGL
RFKGLAKEAAAEDLLITLEEILEGEKAKDKVRKILQVLREKDEEEEEIDWEELLNSDGDT
NSA

Transcript Sequence

Gene sequence data has not been registered.